Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.17□□□□□ -0.3
Ecm1Q61508 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ecm1Q61508 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm12990-201ENSMUST00000120372 468 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm7504-201ENSMUST00000201449 424 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.17□□□□□ -0.3
Ecm1Q61508 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.17□□□□□ -0.3
Ecm1Q61508 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ecm1Q61508 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ecm1Q61508 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.16□□□□□ -0.3
Ecm1Q61508 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.16□□□□□ -0.3
Ecm1Q61508 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm14892-201ENSMUST00000117636 267 ntBASIC13.16□□□□□ -0.3
Ecm1Q61508 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm37826-201ENSMUST00000195329 322 ntBASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.16□□□□□ -0.3
Ecm1Q61508 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Gm4978-201ENSMUST00000071565 801 ntBASIC13.16□□□□□ -0.3
Ecm1Q61508 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ecm1Q61508 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ecm1Q61508 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ecm1Q61508 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ecm1Q61508 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ecm1Q61508 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ecm1Q61508 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ecm1Q61508 Gm13600-201ENSMUST00000117949 744 ntBASIC13.15□□□□□ -0.3
Ecm1Q61508 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.15□□□□□ -0.3
Ecm1Q61508 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.15□□□□□ -0.3
Ecm1Q61508 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms