Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm27440-201ENSMUST00000184785 107 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm9369-201ENSMUST00000196009 733 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm18001-201ENSMUST00000212023 688 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col12a1Q60847 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col12a1Q60847 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm22937-201ENSMUST00000103954 131 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm8111-201ENSMUST00000117659 987 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Col12a1Q60847 Id2-203ENSMUST00000222667 958 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.47□□□□□ -0.57
Col12a1Q60847 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.47□□□□□ -0.57
Col12a1Q60847 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.47□□□□□ -0.57
Col12a1Q60847 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col12a1Q60847 Gm15197-201ENSMUST00000120526 478 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 Gm20781-201ENSMUST00000193154 693 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 Gm21736-201ENSMUST00000195399 693 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.46□□□□□ -0.57
Col12a1Q60847 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.46□□□□□ -0.57
Col12a1Q60847 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.46□□□□□ -0.57
Col12a1Q60847 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col12a1Q60847 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.46□□□□□ -0.58
Col12a1Q60847 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Col12a1Q60847 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Col12a1Q60847 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col12a1Q60847 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms