Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm26448-201ENSMUST00000082446 203 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prdm1Q60636 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Prdm1Q60636 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.93□□□□□ -0.18
Prdm1Q60636 Gm25732-201ENSMUST00000175168 60 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Gm43184-201ENSMUST00000197247 542 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Prdm1Q60636 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Gm807-202ENSMUST00000224929 408 ntBASIC13.93□□□□□ -0.18
Prdm1Q60636 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prdm1Q60636 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.93□□□□□ -0.18
Prdm1Q60636 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prdm1Q60636 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.92□□□□□ -0.18
Prdm1Q60636 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Gm14441-201ENSMUST00000121960 540 ntBASIC13.92□□□□□ -0.18
Prdm1Q60636 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Mir7677-201ENSMUST00000184226 67 ntBASIC13.92□□□□□ -0.18
Prdm1Q60636 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Gm3332-201ENSMUST00000189337 928 ntBASIC13.92□□□□□ -0.18
Prdm1Q60636 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prdm1Q60636 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.92□□□□□ -0.18
Prdm1Q60636 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prdm1Q60636 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm8343-201ENSMUST00000182705 994 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Gm37466-201ENSMUST00000195692 652 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms