Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm13461-201ENSMUST00000120980 662 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm45575-201ENSMUST00000210283 548 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm10288-201ENSMUST00000084614 537 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.31□□□□□ -0.12
Vps54Q5SPW0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Gm2965-201ENSMUST00000198365 343 ntBASIC14.3□□□□□ -0.12
Vps54Q5SPW0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.3□□□□□ -0.12
Vps54Q5SPW0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps54Q5SPW0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Gm43138-201ENSMUST00000199123 708 ntBASIC14.29□□□□□ -0.12
Vps54Q5SPW0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Vps54Q5SPW0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms