Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm23062-201ENSMUST00000102349 110 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm26272-201ENSMUST00000179241 132 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm2553-201ENSMUST00000215986 605 ntBASIC12.09□□□□□ -0.47
Bdp1Q571C7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bdp1Q571C7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Bdp1Q571C7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Bdp1Q571C7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Mir874-201ENSMUST00000104769 76 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm18711-201ENSMUST00000199341 750 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Mir453-201ENSMUST00000104732 82 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm26313-201ENSMUST00000157770 308 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Gm37365-201ENSMUST00000193109 409 ntBASIC12.08□□□□□ -0.48
Bdp1Q571C7 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bdp1Q571C7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms