Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Mir744-201ENSMUST00000103261 100 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm15615-201ENSMUST00000118876 198 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm14034-201ENSMUST00000120147 551 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm15620-201ENSMUST00000122949 270 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm25677-201ENSMUST00000174983 72 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm11942-201ENSMUST00000180255 345 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gm23105-201ENSMUST00000083719 134 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm11996-201ENSMUST00000117538 915 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm14247-201ENSMUST00000120950 237 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm38151-201ENSMUST00000195085 289 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm37826-201ENSMUST00000195329 322 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm43854-201ENSMUST00000200418 394 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm5599-201ENSMUST00000209602 788 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Fam196aQ3USH1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fam196aQ3USH1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Fam196aQ3USH1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Fam196aQ3USH1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Fam196aQ3USH1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Fam196aQ3USH1 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms