Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Shisa3Q3UPR0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm23931-201ENSMUST00000103842 109 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm8062-201ENSMUST00000139696 444 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm25026-201ENSMUST00000175017 188 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Gm27514-201ENSMUST00000183692 110 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 CT009713.1-201ENSMUST00000224828 853 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Shisa3Q3UPR0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm5187-201ENSMUST00000117317 991 ntBASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm9083-201ENSMUST00000120423 819 ntBASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm12363-201ENSMUST00000122250 668 ntBASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Shisa3Q3UPR0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms