Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm45433-201ENSMUST00000209386 247 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm6963-201ENSMUST00000147879 379 ntBASIC14.07□□□□□ -0.16
Limch1Q3UH68 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm5070-201ENSMUST00000177599 862 ntBASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Limch1Q3UH68 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm12015-201ENSMUST00000117065 843 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm5706-201ENSMUST00000181525 993 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm7003-201ENSMUST00000195089 312 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Limch1Q3UH68 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.06□□□□□ -0.16
Limch1Q3UH68 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms