Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm10179-201ENSMUST00000086233 688 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm22920-201ENSMUST00000102175 109 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm16071-201ENSMUST00000119589 793 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm12208-201ENSMUST00000122004 163 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm15881-201ENSMUST00000148792 942 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm28937-201ENSMUST00000185413 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm29400-201ENSMUST00000187208 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm28662-201ENSMUST00000188446 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm28251-201ENSMUST00000188835 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm17826-201ENSMUST00000189720 798 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm37318-201ENSMUST00000194325 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm38017-201ENSMUST00000194768 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm37287-201ENSMUST00000195449 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm37793-201ENSMUST00000195548 695 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm44329-201ENSMUST00000197469 112 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm43520-201ENSMUST00000197996 164 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm43186-201ENSMUST00000198130 824 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col9a2Q07643 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.92□□□□□ -0.34
Col9a2Q07643 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Col9a2Q07643 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a2Q07643 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm37299-201ENSMUST00000193951 826 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm9463-201ENSMUST00000206707 601 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm7940-201ENSMUST00000218195 769 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.91□□□□□ -0.34
Col9a2Q07643 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.91□□□□□ -0.34
Col9a2Q07643 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.91□□□□□ -0.34
Col9a2Q07643 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a2Q07643 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms