Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Gm11989-201ENSMUST00000117240 672 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm11362-201ENSMUST00000118838 850 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm8566-201ENSMUST00000120174 465 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm7722-201ENSMUST00000120646 741 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gm29615-201ENSMUST00000185371 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28224-201ENSMUST00000186078 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm29001-201ENSMUST00000186177 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28292-201ENSMUST00000186593 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28101-201ENSMUST00000187608 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm29076-201ENSMUST00000187689 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28302-201ENSMUST00000187931 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28646-201ENSMUST00000188220 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm9230-201ENSMUST00000188228 532 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28205-201ENSMUST00000189177 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm29032-201ENSMUST00000189797 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm28695-201ENSMUST00000190300 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm37448-201ENSMUST00000192795 697 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm44551-201ENSMUST00000208804 171 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.38□□□□□ -0.43
Vps45P97390 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.38□□□□□ -0.43
Vps45P97390 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps45P97390 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps45P97390 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.37□□□□□ -0.43
Vps45P97390 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps45P97390 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps45P97390 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps45P97390 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.37□□□□□ -0.43
Vps45P97390 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps45P97390 Gm8194-201ENSMUST00000159783 859 ntBASIC12.37□□□□□ -0.43
Vps45P97390 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps45P97390 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Gm19187-201ENSMUST00000206781 892 ntBASIC12.37□□□□□ -0.43
Vps45P97390 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.37□□□□□ -0.43
Vps45P97390 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps45P97390 Ntng1-201ENSMUST00000051253 327 ntBASIC12.37□□□□□ -0.43
Vps45P97390 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps45P97390 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Vps45P97390 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps45P97390 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.37□□□□□ -0.43
Vps45P97390 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps45P97390 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps45P97390 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps45P97390 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps45P97390 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps45P97390 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.36□□□□□ -0.43
Vps45P97390 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms