Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SgcbP82349 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
SgcbP82349 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcbP82349 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm24990-201ENSMUST00000157406 323 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcbP82349 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm28745-201ENSMUST00000190069 305 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.71□□□□□ -0.69
SgcbP82349 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.71□□□□□ -0.69
SgcbP82349 Gm19208-201ENSMUST00000213861 912 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm5455-201ENSMUST00000058710 715 ntBASIC10.71□□□□□ -0.69
SgcbP82349 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
SgcbP82349 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.71□□□□□ -0.7
SgcbP82349 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcbP82349 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SgcbP82349 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.71□□□□□ -0.7
SgcbP82349 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SgcbP82349 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Gm14201-201ENSMUST00000117627 289 ntBASIC10.7□□□□□ -0.7
SgcbP82349 Gm11439-201ENSMUST00000118598 409 ntBASIC10.7□□□□□ -0.7
SgcbP82349 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Gm27341-201ENSMUST00000183570 106 ntBASIC10.7□□□□□ -0.7
SgcbP82349 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SgcbP82349 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SgcbP82349 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SgcbP82349 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.7□□□□□ -0.7
SgcbP82349 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Gm14028-201ENSMUST00000117434 479 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Gm11511-201ENSMUST00000118146 540 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Gm14208-201ENSMUST00000119645 678 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms