Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ybx1P62960 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.25□□□□□ -0.45
Ybx1P62960 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ybx1P62960 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.25□□□□□ -0.45
Ybx1P62960 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ybx1P62960 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ybx1P62960 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ybx1P62960 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm15207-201ENSMUST00000119259 442 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm1848-201ENSMUST00000120711 789 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm11836-201ENSMUST00000121022 441 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Mir1901-201ENSMUST00000122616 78 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ybx1P62960 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm23045-201ENSMUST00000175041 96 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm25072-201ENSMUST00000175233 235 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm4654-201ENSMUST00000183305 982 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Mir6998-201ENSMUST00000183343 64 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm29155-201ENSMUST00000185910 269 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm5714-201ENSMUST00000197343 566 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.24□□□□□ -0.45
Ybx1P62960 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.24□□□□□ -0.45
Ybx1P62960 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ybx1P62960 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ybx1P62960 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm11451-201ENSMUST00000118946 630 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Mir1956-201ENSMUST00000157748 65 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Ybx1P62960 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ybx1P62960 Gm28324-201ENSMUST00000187913 264 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Gm37028-201ENSMUST00000194276 107 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Gm9645-201ENSMUST00000197131 792 ntBASIC12.23□□□□□ -0.45
Ybx1P62960 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms