Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.64□□□□□ -0.87
Sssca1P56873 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Sssca1P56873 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm11591-201ENSMUST00000120063 702 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Gm14999-201ENSMUST00000121039 624 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Sssca1P56873 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm37201-201ENSMUST00000191845 523 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.64□□□□□ -0.87
Sssca1P56873 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Sssca1P56873 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Sssca1P56873 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sssca1P56873 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm4984-201ENSMUST00000115987 360 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm13570-201ENSMUST00000140763 309 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm7809-201ENSMUST00000153199 742 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Sssca1P56873 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm5035-201ENSMUST00000215581 927 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Sssca1P56873 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.63□□□□□ -0.87
Sssca1P56873 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
Sssca1P56873 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Sssca1P56873 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.63□□□□□ -0.87
Sssca1P56873 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms