Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp5P56399 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.94□□□□□ -0.18
Usp5P56399 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp5P56399 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.93□□□□□ -0.18
Usp5P56399 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Gm14058-201ENSMUST00000116082 735 ntBASIC13.93□□□□□ -0.18
Usp5P56399 Gm12857-201ENSMUST00000117678 592 ntBASIC13.93□□□□□ -0.18
Usp5P56399 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.93□□□□□ -0.18
Usp5P56399 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.93□□□□□ -0.18
Usp5P56399 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.93□□□□□ -0.18
Usp5P56399 Gm5369-201ENSMUST00000217499 588 ntBASIC13.93□□□□□ -0.18
Usp5P56399 Gm9797-202ENSMUST00000218003 294 ntBASIC13.93□□□□□ -0.18
Usp5P56399 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Usp5P56399 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp5P56399 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.92□□□□□ -0.18
Usp5P56399 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.92□□□□□ -0.18
Usp5P56399 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.92□□□□□ -0.18
Usp5P56399 Gm13035-201ENSMUST00000117496 342 ntBASIC13.92□□□□□ -0.18
Usp5P56399 Gm11660-201ENSMUST00000120955 412 ntBASIC13.92□□□□□ -0.18
Usp5P56399 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.92□□□□□ -0.18
Usp5P56399 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.92□□□□□ -0.18
Usp5P56399 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.92□□□□□ -0.18
Usp5P56399 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.92□□□□□ -0.18
Usp5P56399 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.92□□□□□ -0.18
Usp5P56399 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Usp5P56399 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp5P56399 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.91□□□□□ -0.18
Usp5P56399 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Usp5P56399 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Usp5P56399 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.91□□□□□ -0.18
Usp5P56399 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Usp5P56399 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Usp5P56399 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Gm15004-201ENSMUST00000119192 630 ntBASIC13.91□□□□□ -0.18
Usp5P56399 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.91□□□□□ -0.18
Usp5P56399 Gm27530-201ENSMUST00000184096 98 ntBASIC13.91□□□□□ -0.18
Usp5P56399 Gm43378-201ENSMUST00000199336 582 ntBASIC13.91□□□□□ -0.18
Usp5P56399 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp5P56399 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Usp5P56399 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp5P56399 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms