Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NcanP55066 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
NcanP55066 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.55□□□□□ -0.4
NcanP55066 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.55□□□□□ -0.4
NcanP55066 Gm13422-201ENSMUST00000118834 504 ntBASIC12.55□□□□□ -0.4
NcanP55066 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NcanP55066 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.55□□□□□ -0.4
NcanP55066 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.55□□□□□ -0.4
NcanP55066 Gm8384-201ENSMUST00000190905 704 ntBASIC12.55□□□□□ -0.4
NcanP55066 Gm33707-201ENSMUST00000195135 569 ntBASIC12.55□□□□□ -0.4
NcanP55066 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC12.55□□□□□ -0.4
NcanP55066 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
NcanP55066 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.55□□□□□ -0.4
NcanP55066 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.55□□□□□ -0.4
NcanP55066 Gm26670-202ENSMUST00000226862 340 ntBASIC12.55□□□□□ -0.4
NcanP55066 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Map1b-203ENSMUST00000223725 2669 ntBASIC12.55□□□□□ -0.4
NcanP55066 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.55□□□□□ -0.4
NcanP55066 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NcanP55066 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
NcanP55066 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.54□□□□□ -0.4
NcanP55066 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.54□□□□□ -0.4
NcanP55066 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NcanP55066 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NcanP55066 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NcanP55066 Gm23604-201ENSMUST00000104311 132 ntBASIC12.54□□□□□ -0.4
NcanP55066 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.54□□□□□ -0.4
NcanP55066 Gm12345-201ENSMUST00000119288 898 ntBASIC12.54□□□□□ -0.4
NcanP55066 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NcanP55066 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm14395-201ENSMUST00000120494 563 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm15982-201ENSMUST00000121681 554 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm25394-201ENSMUST00000157338 133 ntBASIC12.54□□□□□ -0.4
NcanP55066 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm5468-202ENSMUST00000227851 682 ntBASIC12.54□□□□□ -0.4
NcanP55066 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NcanP55066 Gm6564-201ENSMUST00000075377 619 ntBASIC12.54□□□□□ -0.4
NcanP55066 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.54□□□□□ -0.4
NcanP55066 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NcanP55066 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.54□□□□□ -0.4
NcanP55066 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NcanP55066 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
NcanP55066 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NcanP55066 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Gm13094-201ENSMUST00000117930 409 ntBASIC12.53□□□□□ -0.4
NcanP55066 Gm16210-201ENSMUST00000122161 610 ntBASIC12.53□□□□□ -0.4
NcanP55066 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.53□□□□□ -0.4
NcanP55066 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Gm7741-201ENSMUST00000181445 989 ntBASIC12.53□□□□□ -0.4
NcanP55066 Gm43866-201ENSMUST00000203894 839 ntBASIC12.53□□□□□ -0.4
NcanP55066 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.53□□□□□ -0.4
NcanP55066 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.53□□□□□ -0.4
NcanP55066 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NcanP55066 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NcanP55066 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms