Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
NrlP54846 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.73□□□□□ -0.37
NrlP54846 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.73□□□□□ -0.37
NrlP54846 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.73□□□□□ -0.37
NrlP54846 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NrlP54846 Snora73b-201ENSMUST00000083419 205 ntBASIC12.73□□□□□ -0.37
NrlP54846 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.73□□□□□ -0.37
NrlP54846 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NrlP54846 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.73□□□□□ -0.37
NrlP54846 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NrlP54846 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NrlP54846 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.72□□□□□ -0.37
NrlP54846 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.72□□□□□ -0.37
NrlP54846 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.72□□□□□ -0.37
NrlP54846 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Gm45575-201ENSMUST00000210283 548 ntBASIC12.72□□□□□ -0.37
NrlP54846 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NrlP54846 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NrlP54846 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
NrlP54846 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.71□□□□□ -0.37
NrlP54846 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NrlP54846 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
NrlP54846 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.71□□□□□ -0.37
NrlP54846 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NrlP54846 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NrlP54846 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
NrlP54846 Gm12795-201ENSMUST00000117594 539 ntBASIC12.71□□□□□ -0.37
NrlP54846 Gm11660-201ENSMUST00000120955 412 ntBASIC12.71□□□□□ -0.37
NrlP54846 Gm16397-201ENSMUST00000122201 494 ntBASIC12.71□□□□□ -0.37
NrlP54846 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Gm2517-201ENSMUST00000215651 348 ntBASIC12.71□□□□□ -0.37
NrlP54846 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NrlP54846 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
NrlP54846 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.71□□□□□ -0.38
NrlP54846 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NrlP54846 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.71□□□□□ -0.38
NrlP54846 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NrlP54846 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NrlP54846 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NrlP54846 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NrlP54846 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
NrlP54846 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NrlP54846 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NrlP54846 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms