Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.91□□□□□ -0.5
Atxn1P54254 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Gm43520-201ENSMUST00000197996 164 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm42657-201ENSMUST00000201746 211 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Gm44980-201ENSMUST00000205826 314 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm35713-201ENSMUST00000210516 199 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm19994-201ENSMUST00000217086 586 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Atxn1P54254 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Atxn1P54254 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Atxn1P54254 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Atxn1P54254 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.91□□□□□ -0.5
Atxn1P54254 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.9□□□□□ -0.5
Atxn1P54254 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.9□□□□□ -0.5
Atxn1P54254 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.9□□□□□ -0.5
Atxn1P54254 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.9□□□□□ -0.5
Atxn1P54254 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm2965-201ENSMUST00000198365 343 ntBASIC11.9□□□□□ -0.5
Atxn1P54254 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.9□□□□□ -0.5
Atxn1P54254 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.9□□□□□ -0.5
Atxn1P54254 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Atxn1P54254 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.9□□□□□ -0.5
Atxn1P54254 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Atxn1P54254 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atxn1P54254 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Atxn1P54254 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Atxn1P54254 Gm14724-201ENSMUST00000118400 537 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Gm16071-201ENSMUST00000119589 793 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Gm5257-201ENSMUST00000121823 790 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Gm17826-201ENSMUST00000189720 798 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.89□□□□□ -0.51
Atxn1P54254 Gm9645-201ENSMUST00000197131 792 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Gm18463-201ENSMUST00000207258 474 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms