Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox1P53783 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox1P53783 Gm6450-201ENSMUST00000200896 574 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox1P53783 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox1P53783 Gm6564-201ENSMUST00000075377 619 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox1P53783 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox1P53783 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sox1P53783 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm12684-201ENSMUST00000118675 999 ntBASIC12.21□□□□□ -0.45
Sox1P53783 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox1P53783 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm27956-201ENSMUST00000175604 260 ntBASIC12.21□□□□□ -0.45
Sox1P53783 Gm26957-201ENSMUST00000182645 977 ntBASIC12.21□□□□□ -0.45
Sox1P53783 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox1P53783 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm44216-201ENSMUST00000203942 157 ntBASIC12.21□□□□□ -0.45
Sox1P53783 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox1P53783 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Gm10263-201ENSMUST00000085163 300 ntBASIC12.21□□□□□ -0.45
Sox1P53783 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.21□□□□□ -0.45
Sox1P53783 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox1P53783 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox1P53783 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.21□□□□□ -0.46
Sox1P53783 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Sox1P53783 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sox1P53783 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Sox1P53783 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox1P53783 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Sox1P53783 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms