Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Brca1P48754 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brca1P48754 Mir744-201ENSMUST00000103261 100 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Gm24992-201ENSMUST00000157412 130 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Gm3329-201ENSMUST00000159873 556 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Gm8756-201ENSMUST00000183250 929 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Mir7051-201ENSMUST00000184167 73 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.18□□□□□ -0.3
Brca1P48754 Gm45094-201ENSMUST00000207013 617 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Brca1P48754 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Gm12418-201ENSMUST00000118116 942 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Gm25226-201ENSMUST00000158198 123 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Gm7985-201ENSMUST00000183329 981 ntBASIC13.18□□□□□ -0.3
Brca1P48754 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC13.18□□□□□ -0.3
Brca1P48754 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.18□□□□□ -0.3
Brca1P48754 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Brca1P48754 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Brca1P48754 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brca1P48754 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Brca1P48754 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Brca1P48754 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Brca1P48754 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.17□□□□□ -0.3
Brca1P48754 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Gm25562-201ENSMUST00000104608 133 ntBASIC13.17□□□□□ -0.3
Brca1P48754 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.17□□□□□ -0.3
Brca1P48754 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.17□□□□□ -0.3
Brca1P48754 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Brca1P48754 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Brca1P48754 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Brca1P48754 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brca1P48754 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.16□□□□□ -0.3
Brca1P48754 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brca1P48754 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm8111-201ENSMUST00000117659 987 ntBASIC13.16□□□□□ -0.3
Brca1P48754 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.16□□□□□ -0.3
Brca1P48754 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms