Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Gm14460-201ENSMUST00000121511 639 ntBASIC12.56□□□□□ -0.4
LmnaP48678 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.56□□□□□ -0.4
LmnaP48678 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.56□□□□□ -0.4
LmnaP48678 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.56□□□□□ -0.4
LmnaP48678 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Gm22058-201ENSMUST00000083393 310 ntBASIC12.56□□□□□ -0.4
LmnaP48678 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.56□□□□□ -0.4
LmnaP48678 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LmnaP48678 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LmnaP48678 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LmnaP48678 Gm42535-201ENSMUST00000197312 1399 ntBASIC12.56□□□□□ -0.4
LmnaP48678 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
LmnaP48678 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Gm13492-201ENSMUST00000119772 665 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Gm23363-201ENSMUST00000175024 79 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Gm19353-201ENSMUST00000184561 445 ntBASIC12.55□□□□□ -0.4
LmnaP48678 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.55□□□□□ -0.4
LmnaP48678 Gm38210-201ENSMUST00000191944 809 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Gm4607-201ENSMUST00000206649 577 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
LmnaP48678 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.55□□□□□ -0.4
LmnaP48678 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.55□□□□□ -0.4
LmnaP48678 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.55□□□□□ -0.4
LmnaP48678 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
LmnaP48678 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LmnaP48678 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
LmnaP48678 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LmnaP48678 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms