Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm43947-201ENSMUST00000203019 959 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Spcs1-203ENSMUST00000226374 592 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.55□□□□□ -0.4
Rfx2P48379 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.55□□□□□ -0.4
Rfx2P48379 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rfx2P48379 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.54□□□□□ -0.4
Rfx2P48379 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.54□□□□□ -0.4
Rfx2P48379 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.54□□□□□ -0.4
Rfx2P48379 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.54□□□□□ -0.4
Rfx2P48379 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.54□□□□□ -0.4
Rfx2P48379 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rfx2P48379 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rfx2P48379 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.53□□□□□ -0.4
Rfx2P48379 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rfx2P48379 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.53□□□□□ -0.4
Rfx2P48379 Gm11450-201ENSMUST00000121144 333 ntBASIC12.53□□□□□ -0.4
Rfx2P48379 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.53□□□□□ -0.4
Rfx2P48379 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Rfx2P48379 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Rfx2P48379 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.53□□□□□ -0.4
Rfx2P48379 Gm270-201ENSMUST00000223010 976 ntBASIC12.53□□□□□ -0.4
Rfx2P48379 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rfx2P48379 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rfx2P48379 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms