Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Gm11964-201ENSMUST00000120982 444 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.24□□□□□ -0.61
Sox6P40645 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.24□□□□□ -0.61
Sox6P40645 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Sox6P40645 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Gm27023-201ENSMUST00000182372 285 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.24□□□□□ -0.61
Sox6P40645 Gm18935-201ENSMUST00000212692 664 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sox6P40645 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.24□□□□□ -0.61
Sox6P40645 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox6P40645 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Sox6P40645 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox6P40645 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Sox6P40645 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Sox6P40645 Gm6007-201ENSMUST00000208170 823 ntBASIC11.23□□□□□ -0.61
Sox6P40645 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox6P40645 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.23□□□□□ -0.61
Sox6P40645 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Sox6P40645 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox6P40645 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox6P40645 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox6P40645 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.23□□□□□ -0.61
Sox6P40645 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox6P40645 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox6P40645 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms