Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl12P40224 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm11500-201ENSMUST00000118237 601 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl12P40224 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm17192-201ENSMUST00000169031 511 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm10807-201ENSMUST00000177134 795 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm28937-201ENSMUST00000185413 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm29400-201ENSMUST00000187208 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm28662-201ENSMUST00000188446 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm28251-201ENSMUST00000188835 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm37318-201ENSMUST00000194325 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm38017-201ENSMUST00000194768 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm37287-201ENSMUST00000195449 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm37793-201ENSMUST00000195548 695 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm17931-201ENSMUST00000208132 634 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm45527-201ENSMUST00000211052 774 ntBASIC12.26□□□□□ -0.45
Cxcl12P40224 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.26□□□□□ -0.45
Cxcl12P40224 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cxcl12P40224 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl12P40224 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Mir181d-201ENSMUST00000102383 72 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm9673-201ENSMUST00000119287 781 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm26368-201ENSMUST00000157826 118 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm25830-201ENSMUST00000158923 132 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm20414-201ENSMUST00000172918 646 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm25677-201ENSMUST00000174983 72 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm37852-201ENSMUST00000193027 350 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm43163-201ENSMUST00000196571 442 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm43969-201ENSMUST00000204833 535 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cxcl12P40224 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms