Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm9136-201ENSMUST00000193368 454 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 AY702102-202ENSMUST00000194651 1173 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc5P32043 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm7046-201ENSMUST00000221351 977 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Hoxc5P32043 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxc5P32043 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxc5P32043 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm12742-201ENSMUST00000117326 410 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gm9996-201ENSMUST00000070359 913 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.08□□□□□ -0.64
Hoxc5P32043 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
Hoxc5P32043 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc5P32043 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.07□□□□□ -0.64
Hoxc5P32043 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm13392-201ENSMUST00000117708 150 ntBASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm13297-201ENSMUST00000120205 934 ntBASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm17420-201ENSMUST00000164753 153 ntBASIC11.07□□□□□ -0.64
Hoxc5P32043 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxc5P32043 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms