Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm14350-201ENSMUST00000116642 640 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm14660-201ENSMUST00000119809 575 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm27731-201ENSMUST00000185192 107 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm44069-201ENSMUST00000204898 506 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.29□□□□□ -0.76
Slc6a1P31648 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.29□□□□□ -0.76
Slc6a1P31648 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm12036-201ENSMUST00000120008 530 ntBASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.28□□□□□ -0.76
Slc6a1P31648 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Slc6a1P31648 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.28□□□□□ -0.76
Slc6a1P31648 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Slc6a1P31648 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Slc6a1P31648 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms