Protein–RNA interactions for Protein: P28705

Rxrg, Retinoic acid receptor RXR-gamma, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrgP28705 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RxrgP28705 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RxrgP28705 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
RxrgP28705 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
RxrgP28705 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RxrgP28705 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RxrgP28705 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrgP28705 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrgP28705 Rmrp-201ENSMUST00000157463 271 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrgP28705 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.08□□□□□ -0.48
RxrgP28705 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Gm42937-201ENSMUST00000197360 752 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Gm44100-201ENSMUST00000204329 436 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.08□□□□□ -0.48
RxrgP28705 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.08□□□□□ -0.48
RxrgP28705 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.08□□□□□ -0.48
RxrgP28705 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RxrgP28705 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RxrgP28705 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RxrgP28705 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RxrgP28705 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Gm23949-201ENSMUST00000104027 127 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RxrgP28705 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RxrgP28705 Gm12616-201ENSMUST00000118594 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Gm5616-201ENSMUST00000165252 384 ntBASIC12.07□□□□□ -0.48
RxrgP28705 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Gm8741-201ENSMUST00000174736 384 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12624-201ENSMUST00000177615 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12621-201ENSMUST00000177760 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12615-201ENSMUST00000177970 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12622-201ENSMUST00000177975 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12627-201ENSMUST00000178412 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12625-201ENSMUST00000179122 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Gm12614-201ENSMUST00000179586 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RxrgP28705 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Gm12613-201ENSMUST00000180323 382 ntBASIC12.07□□□□□ -0.48
RxrgP28705 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.07□□□□□ -0.48
RxrgP28705 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.07□□□□□ -0.48
RxrgP28705 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RxrgP28705 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms