Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col2a1P28481 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
Col2a1P28481 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm24398-201ENSMUST00000157870 109 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Gm18561-201ENSMUST00000206027 804 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Gm45594-201ENSMUST00000211717 241 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Gm45856-201ENSMUST00000212752 416 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Col2a1P28481 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.39□□□□□ -0.27
Col2a1P28481 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col2a1P28481 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.39□□□□□ -0.27
Col2a1P28481 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col2a1P28481 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col2a1P28481 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm12218-201ENSMUST00000117666 399 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.38□□□□□ -0.27
Col2a1P28481 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Mir6958-201ENSMUST00000184207 73 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Gm37826-201ENSMUST00000195329 322 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm44008-201ENSMUST00000204345 412 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm30671-201ENSMUST00000214898 318 ntBASIC13.38□□□□□ -0.27
Col2a1P28481 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.38□□□□□ -0.27
Col2a1P28481 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.38□□□□□ -0.27
Col2a1P28481 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.38□□□□□ -0.27
Col2a1P28481 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col2a1P28481 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.38□□□□□ -0.27
Col2a1P28481 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col2a1P28481 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Col2a1P28481 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col2a1P28481 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col2a1P28481 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col2a1P28481 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col2a1P28481 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.37□□□□□ -0.27
Col2a1P28481 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.37□□□□□ -0.27
Col2a1P28481 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.37□□□□□ -0.27
Col2a1P28481 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.37□□□□□ -0.27
Col2a1P28481 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.37□□□□□ -0.27
Col2a1P28481 Gm29067-201ENSMUST00000190821 470 ntBASIC13.37□□□□□ -0.27
Col2a1P28481 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.37□□□□□ -0.27
Col2a1P28481 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.37□□□□□ -0.27
Col2a1P28481 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Gm39288-201ENSMUST00000210554 446 ntBASIC13.37□□□□□ -0.27
Col2a1P28481 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col2a1P28481 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms