Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Hoxc6P10629 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm11801-201ENSMUST00000117807 746 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm11980-201ENSMUST00000121445 986 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm44315-201ENSMUST00000203041 219 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.22□□□□□ -0.29
Hoxc6P10629 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxc6P10629 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxc6P10629 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm13047-201ENSMUST00000117116 815 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm26047-201ENSMUST00000157308 113 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm26047-202ENSMUST00000198840 115 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm8574-201ENSMUST00000203207 924 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm44124-201ENSMUST00000204159 472 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm9139-201ENSMUST00000218817 700 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.21□□□□□ -0.29
Hoxc6P10629 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hoxc6P10629 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxc6P10629 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc6P10629 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc6P10629 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc6P10629 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc6P10629 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxc6P10629 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Hoxc6P10629 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms