Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxa4P06798 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gm7851-201ENSMUST00000117574 323 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Gm10288-201ENSMUST00000084614 537 ntBASIC11.76□□□□□ -0.53
Hoxa4P06798 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxa4P06798 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa4P06798 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm13263-201ENSMUST00000121271 838 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Mir7070-201ENSMUST00000183657 86 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm28937-201ENSMUST00000185413 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm29400-201ENSMUST00000187208 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm28662-201ENSMUST00000188446 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm28251-201ENSMUST00000188835 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm37318-201ENSMUST00000194325 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm38017-201ENSMUST00000194768 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm37287-201ENSMUST00000195449 695 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm37793-201ENSMUST00000195548 695 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms