Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm38216-201ENSMUST00000194872 1214 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm38317-201ENSMUST00000195564 343 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Rprl1-202ENSMUST00000198476 238 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm44651-201ENSMUST00000207343 372 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm6082-201ENSMUST00000215204 454 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.13□□□□□ -0.47
PdgfrbP05622 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PdgfrbP05622 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PdgfrbP05622 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm15610-201ENSMUST00000120584 195 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm32999-201ENSMUST00000192693 562 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm18893-201ENSMUST00000198416 943 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm13097-201ENSMUST00000210722 397 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.12□□□□□ -0.47
PdgfrbP05622 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.12□□□□□ -0.47
PdgfrbP05622 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
PdgfrbP05622 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdgfrbP05622 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm35960-201ENSMUST00000202712 767 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms