Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.06□□□□□ -0.8
Hoxa3P02831 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Hoxa3P02831 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm12176-201ENSMUST00000121420 875 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm27627-201ENSMUST00000183644 150 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm18730-201ENSMUST00000218038 343 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.05□□□□□ -0.8
Hoxa3P02831 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hoxa3P02831 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.05□□□□□ -0.8
Hoxa3P02831 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm12266-201ENSMUST00000120311 962 ntBASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm20426-201ENSMUST00000173657 440 ntBASIC10.04□□□□□ -0.8
Hoxa3P02831 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gm43962-201ENSMUST00000203898 190 ntBASIC10.04□□□□□ -0.8
Hoxa3P02831 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Hoxa3P02831 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hoxa3P02831 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Hoxa3P02831 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hoxa3P02831 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.03□□□□□ -0.8
Hoxa3P02831 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms