Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubr1O70481 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.21■□□□□ 0.03
Ubr1O70481 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubr1O70481 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr1O70481 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr1O70481 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.21■□□□□ 0.02
Ubr1O70481 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr1O70481 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.21■□□□□ 0.02
Ubr1O70481 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC15.21■□□□□ 0.02
Ubr1O70481 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC15.21■□□□□ 0.02
Ubr1O70481 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr1O70481 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ubr1O70481 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ubr1O70481 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Ubr1O70481 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Gm44056-201ENSMUST00000204623 1427 ntBASIC15.2■□□□□ 0.02
Ubr1O70481 Gm13549-201ENSMUST00000118339 796 ntBASIC15.2■□□□□ 0.02
Ubr1O70481 Gm7541-201ENSMUST00000118361 535 ntBASIC15.2■□□□□ 0.02
Ubr1O70481 Gm15329-201ENSMUST00000121408 155 ntBASIC15.2■□□□□ 0.02
Ubr1O70481 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.2■□□□□ 0.02
Ubr1O70481 Gm7525-201ENSMUST00000219425 454 ntBASIC15.2■□□□□ 0.02
Ubr1O70481 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ubr1O70481 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubr1O70481 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Ubr1O70481 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ubr1O70481 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ubr1O70481 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm25562-201ENSMUST00000104608 133 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm15003-201ENSMUST00000118884 446 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.19■□□□□ 0.02
Ubr1O70481 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm14270-201ENSMUST00000118388 846 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Gm12663-201ENSMUST00000118481 958 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm33366-201ENSMUST00000195583 3827 ntBASIC15.19■□□□□ 0.02
Ubr1O70481 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.19■□□□□ 0.02
Ubr1O70481 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.19■□□□□ 0.02
Ubr1O70481 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms