Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf3O08791 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf3O08791 Gm11667-201ENSMUST00000119828 486 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 Gm7722-201ENSMUST00000120646 741 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf3O08791 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf3O08791 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Ebf3O08791 Gm27530-201ENSMUST00000184096 98 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ebf3O08791 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf3O08791 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf3O08791 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf3O08791 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ebf3O08791 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.45□□□□□ -0.42
Ebf3O08791 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf3O08791 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ebf3O08791 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Gm12208-201ENSMUST00000122004 163 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ebf3O08791 Ginm1-202ENSMUST00000065124 300 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.44□□□□□ -0.42
Ebf3O08791 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.44□□□□□ -0.42
Ebf3O08791 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ebf3O08791 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ebf3O08791 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ebf3O08791 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms