Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm26119-201ENSMUST00000175601 104 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm8707-201ENSMUST00000183325 980 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm43460-201ENSMUST00000202491 1057 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 AC105950.2-201ENSMUST00000220938 368 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Pfdn4-202ENSMUST00000075087 816 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm7642-201ENSMUST00000216345 1809 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm15599-201ENSMUST00000122283 1345 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ighv1-67-201ENSMUST00000103538 294 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Mir7029-201ENSMUST00000184777 61 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm29485-201ENSMUST00000190220 282 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm37597-201ENSMUST00000191853 382 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm9516-201ENSMUST00000119684 424 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm43033-201ENSMUST00000199682 425 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm7384-201ENSMUST00000203682 530 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm3926-201ENSMUST00000223378 1123 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm9790-201ENSMUST00000054148 288 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 AC093022.4-203ENSMUST00000228523 2657 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 AC126257.1-201ENSMUST00000213195 1536 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm38273-201ENSMUST00000194987 2382 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm37486-201ENSMUST00000195663 405 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Gm43693-201ENSMUST00000196072 1249 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC6.11□□□□□ -1.43
Ubr4A2AN08 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ubr4A2AN08 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Gm44629-201ENSMUST00000206951 1840 ntBASIC6.1□□□□□ -1.43
Ubr4A2AN08 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ubr4A2AN08 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms