Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cfap99A0A140LIX9 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Gm11667-201ENSMUST00000119828 486 ntBASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Gm44958-201ENSMUST00000203734 736 ntBASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Pck2-205ENSMUST00000226352 2784 ntBASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cfap99A0A140LIX9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm13888-201ENSMUST00000119148 422 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm12196-201ENSMUST00000120954 262 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm4482-201ENSMUST00000200876 742 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm42599-201ENSMUST00000201308 469 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap99A0A140LIX9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm7851-201ENSMUST00000117574 323 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm12029-201ENSMUST00000120073 832 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm23119-201ENSMUST00000158610 140 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.28□□□□□ -0.12
Cfap99A0A140LIX9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms