Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Phf1Q9Z1B8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm22334-201ENSMUST00000158070 133 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm27390-201ENSMUST00000184516 176 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm43947-201ENSMUST00000203019 959 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm44958-201ENSMUST00000203734 736 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm17812-201ENSMUST00000204935 318 ntBASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.05□□□□□ -0.64
Phf1Q9Z1B8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm24934-201ENSMUST00000103764 111 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm9230-201ENSMUST00000188228 532 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Phf1Q9Z1B8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms