Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm9550-201ENSMUST00000161130 862 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm43520-201ENSMUST00000197996 164 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm8574-201ENSMUST00000203207 924 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12616-201ENSMUST00000118594 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm8459-201ENSMUST00000162504 760 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12624-201ENSMUST00000177615 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12621-201ENSMUST00000177760 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12615-201ENSMUST00000177970 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12622-201ENSMUST00000177975 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12627-201ENSMUST00000178412 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12625-201ENSMUST00000179122 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12614-201ENSMUST00000179586 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm12613-201ENSMUST00000180323 382 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn8aQ9WTU3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn8aQ9WTU3 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn8aQ9WTU3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms