Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm22323-201ENSMUST00000103832 109 ntBASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61a2Q9JLR1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Gm23912-201ENSMUST00000104687 87 ntBASIC10.79□□□□□ -0.68
Sec61a2Q9JLR1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms