Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm14277-201ENSMUST00000121195 360 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm17040-202ENSMUST00000170597 889 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm28686-201ENSMUST00000187404 609 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm29199-201ENSMUST00000187766 775 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Gm6450-201ENSMUST00000200896 574 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk3aQ9JKX8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm8566-201ENSMUST00000120174 465 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm12266-201ENSMUST00000120311 962 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm12196-201ENSMUST00000120954 262 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm11960-201ENSMUST00000122068 925 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm25881-201ENSMUST00000157783 103 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm16505-201ENSMUST00000179981 232 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm38117-201ENSMUST00000194653 939 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms