Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ube4bQ9ES00 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm16202-201ENSMUST00000117532 544 ntBASIC11.48□□□□□ -0.57
Ube4bQ9ES00 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm2495-201ENSMUST00000191160 466 ntBASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm44069-201ENSMUST00000204898 506 ntBASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube4bQ9ES00 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gm14350-201ENSMUST00000116642 640 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gm28911-201ENSMUST00000188837 117 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gm8515-201ENSMUST00000194852 576 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube4bQ9ES00 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ube4bQ9ES00 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.46□□□□□ -0.57
Ube4bQ9ES00 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube4bQ9ES00 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube4bQ9ES00 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube4bQ9ES00 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms