Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm9996-201ENSMUST00000070359 913 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm11960-201ENSMUST00000122068 925 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm9192-201ENSMUST00000183221 985 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm6745-201ENSMUST00000199216 526 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm19994-201ENSMUST00000217086 586 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssu72Q9CY97 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm16379-201ENSMUST00000161469 348 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm25927-201ENSMUST00000175058 117 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm8762-201ENSMUST00000193486 339 ntBASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ssu72Q9CY97 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms