Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm6114-201ENSMUST00000182472 968 ntBASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrrc40Q9CRC8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm5070-201ENSMUST00000177599 862 ntBASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lrrc40Q9CRC8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrrc40Q9CRC8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms