Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lsm7Q9CQQ8 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lsm7Q9CQQ8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm15207-201ENSMUST00000119259 442 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm13408-201ENSMUST00000119822 798 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm8199-201ENSMUST00000121323 823 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm13935-201ENSMUST00000121859 798 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm8815-201ENSMUST00000173809 620 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm19353-201ENSMUST00000184561 445 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm7Q9CQQ8 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm13809-201ENSMUST00000117921 597 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm12036-201ENSMUST00000120008 530 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm45575-201ENSMUST00000210283 548 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm7Q9CQQ8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms