Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim8Q99PJ2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm14660-201ENSMUST00000119809 575 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim8Q99PJ2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms