Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf2ird2Q99NI3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 AU022133-201ENSMUST00000200601 873 ntBASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf2ird2Q99NI3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms