Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh4Q99MT2 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm9083-201ENSMUST00000120423 819 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm44958-201ENSMUST00000203734 736 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gzmn-202ENSMUST00000225535 989 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.67□□□□□ -0.54
Msh4Q99MT2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh4Q99MT2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm14130-201ENSMUST00000118417 987 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm44651-201ENSMUST00000207343 372 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.66□□□□□ -0.54
Msh4Q99MT2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms