Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Rnf111Q99ML9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm27501-201ENSMUST00000183599 107 ntBASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf111Q99ML9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm13570-201ENSMUST00000140763 309 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm25043-201ENSMUST00000158604 212 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm23119-201ENSMUST00000158610 140 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm21156-201ENSMUST00000189693 869 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms