Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm12314-201ENSMUST00000118104 538 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm37028-201ENSMUST00000194276 107 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Mir7686-201ENSMUST00000200604 57 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm22133-201ENSMUST00000102082 109 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm12196-201ENSMUST00000120954 262 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm15881-201ENSMUST00000148792 942 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm45398-201ENSMUST00000210561 165 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm9996-201ENSMUST00000070359 913 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.53□□□□□ -0.72
Scrt1Q99M85 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.53□□□□□ -0.72
Scrt1Q99M85 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms