Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Smarcd2Q99JR8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd2Q99JR8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd2Q99JR8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm3793-201ENSMUST00000204973 672 ntBASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd2Q99JR8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm13937-201ENSMUST00000121000 988 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm26047-201ENSMUST00000157308 113 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm37981-201ENSMUST00000194280 535 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm26047-202ENSMUST00000198840 115 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm19009-201ENSMUST00000223072 823 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.07□□□□□ -0.48
Smarcd2Q99JR8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.06□□□□□ -0.48
Smarcd2Q99JR8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms