Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm7666-201ENSMUST00000146631 819 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm27390-201ENSMUST00000184516 176 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm7467-201ENSMUST00000185173 652 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm28686-201ENSMUST00000187404 609 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm9540-201ENSMUST00000188230 478 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm37246-201ENSMUST00000192665 835 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm38247-201ENSMUST00000194675 433 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Mir7686-201ENSMUST00000200604 57 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm43916-201ENSMUST00000205062 967 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm45575-201ENSMUST00000210283 548 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 AC137950.3-201ENSMUST00000228250 246 ntBASIC12.85□□□□□ -0.35
TraipQ8VIG6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm21139-201ENSMUST00000186594 877 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm21156-201ENSMUST00000189693 869 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm8920-201ENSMUST00000196153 924 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm45733-201ENSMUST00000212988 437 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.84□□□□□ -0.35
TraipQ8VIG6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TraipQ8VIG6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TraipQ8VIG6 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC12.83□□□□□ -0.35
TraipQ8VIG6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
TraipQ8VIG6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.83□□□□□ -0.35
TraipQ8VIG6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
TraipQ8VIG6 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms